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This function starts a local Shiny application that provides an interactive graphical interface for the HNSCclassifier package. Users can upload a gene expression matrix, set prediction parameters, and obtain TCGA-based molecular subtype classifications without writing any R code.

Usage

classifyHNSC_interface()

Value

This function is called for its side effect of launching the Shiny application. It does not return a value when the app is stopped.

Details

The Shiny app is bundled inside the package installation directory (under shinyApp/). It relies on the core classification function classifyHNSC and inherits all of its input requirements. Please make sure that all suggested packages (e.g., shiny, DT, etc.) are installed before launching.

Note

The first launch may take a few seconds because the app needs to load the internal pre-trained model and pathway gene sets.

See also

classifyHNSC for the command-line version of the classifier.

Examples

if (FALSE) { # \dontrun{
# Start the Shiny app with default settings
classifyHNSC_interface()
} # }